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Results: 179
Number of items: 179
  • Open Access
    Vreede, J., Bolhuis, P. G., & Swenson, D. W. H. (2017). Path Sampling Simulations of the Mechanisms and Rates of Transitions between Watson-Crick and Hoogsteen Base Pairing in DNA. Biophysical Journal, 112(3, Supplement 1), 214a. https://doi.org/10.1016/j.bpj.2016.11.1181
  • Open Access
    Vijaykumar, A., Ouldridge, T. E., ten Wolde, P. R., & Bolhuis, P. G. (2017). Multiscale simulations of anisotropic particles combining molecular dynamics and Green's function reaction dynamics. Journal of Chemical Physics, 146(11), Article 114106. https://doi.org/10.1063/1.4977515
  • Open Access
    Vijaykumar, A. (2017). Multi-scale simulation of reaction-diffusion systems. [Thesis, fully internal, Universiteit van Amsterdam].
  • Open Access
    Newton, A. C., Kools, R., Swenson, D. W. H., & Bolhuis, P. G. (2017). The opposing effects of isotropic and anisotropic attraction on association kinetics of proteins and colloids. Journal of Chemical Physics, 147(15), Article 155101. https://doi.org/10.1063/1.5006485
  • Open Access
    Cabriolu, R., Refsnes, K. M. S., Bolhuis, P. G., & van Erp, T. S. (2017). Foundations and latest advances in replica exchange transition interface sampling. Journal of Chemical Physics, 147(15), Article 152722. https://doi.org/10.1063/1.4989844
  • Open Access
    Smit, F. X., Luiken, J. A., & Bolhuis, P. G. (2017). Primary Fibril Nucleation of Aggregation Prone Tau Fragments PHF6 and PHF6*. The journal of Physical Chemistry. B, 121(15), 3250-3261. https://doi.org/10.1021/acs.jpcb.6b07045
  • Open Access
    Vijaykumar, A., ten Wolde, P. R., & Bolhuis, P. G. (2017). The magnitude of the intrinsic rate constant: How deep can association reactions be in the diffusion limited regime? Journal of Chemical Physics, 147(18), Article 184108. https://doi.org/10.1063/1.5009547
  • Open Access
    Newton, A. C., Nguyen, T. A., Veen, S. J., Kraft, D. J., Schall, P., & Bolhuis, P. G. (2017). Modelling critical Casimir force induced self-assembly experiments on patchy colloidal dumbbells. Soft Matter, 13(28), 4903-4915. https://doi.org/10.1039/c7sm00668c
  • Open Access
    Brotzakis, Z. F. (2017). Hydration layer dynamics and association mechanisms of food and antifreeze proteins: A Molecular Dynamics and Transition Path Sampling study. [Thesis, fully internal, Universiteit van Amsterdam].
  • Open Access
    Newton, A. C. (2017). Self-assembly via anisotropic interactions: Modeling association kinetics of patchy particle systems and self-assembly induced by critical Casimir forces. [Thesis, fully internal, Universiteit van Amsterdam].
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