Search results
Results: 32
Number of items: 32
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van Hagen, M., Piebes, D. G. E., de Leeuw, W. C., Vuist, I. M., van Roon-Mom, W. M. C., Moerland, P. D., & Verschure, P. J. (2017). The dynamics of early-state transcriptional changes and aggregate formation in a Huntington's disease cell model. BMC Genomics, 18(373), Article 373. https://doi.org/10.1186/s12864-017-3745-z -
Pagano, J. F. B., Rauwerda, H., de Leeuw, W. C., Wackers, P., de Jong, M., Ensink, W., Dekker, R., Nehrdich, U., Spaink, H. P., Jonker, M., & Breit, T. M. (2016). Transcriptome data on maternal RNA of 24 individual zebrafish eggs from five sibling mothers. Data in Brief, 8, 69-72. https://doi.org/10.1016/j.dib.2016.04.045 -
Bruning, O., Rauwerda, H., Dekker, R. J., de Leeuw, W. C., Wackers, P. F. K., Ensink, W. A., Jonker, M. J., & Breit, T. M. (2015). Valuable lessons-learned in transcriptomics experimentation. Transcription, 6(3), 51-55. https://doi.org/10.1080/21541264.2015.1064195 -
Locati, M. D., Terpstra, I., de Leeuw, W. C., Kuzak, M., Rauwerda, H., Ensink, W. A., van Leeuwen, S., Nehrdich, U., Spaink, H. P., Jonker, M. J., Breit, T. M., & Dekker, R. J. (2015). Improving small RNA-seq by using a synthetic spike-in set for size-range quality control together with a set for data normalization. Nucleic Acids Research, 43(14), Article e89. https://doi.org/10.1093/nar/gkv303 -
Jonker, M. J., de Leeuw, W. C., Marinković, M., Wittink, F. R. A., Rauwerda, H., Bruning, O., Ensink, W. A., Fluit, A. C., Boel, C. H., de Jong, M., & Breit, T. M. (2014). Absence/presence calling in microarray-based CGH experiments with non-model organisms. Nucleic Acids Research, 42(11), e94. https://doi.org/10.1093/nar/gku343 -
Marinković, M., de Leeuw, W. C., Ensink, W. A., de Jong, M., Breit, T. M., Admiraal, W., Kraak, M. H. S., & Jonker, M. J. (2012). Gene expression patterns and life cycle responses of toxicant-exposed chironomids. Environmental Science and Technology, 46(22), 12679-12686. https://doi.org/10.1021/es3033617
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Marinković, M., de Leeuw, W. C., de Jong, M., Kraak, M. H. S., Admiraal, W., Breit, T. M., & Jonker, M. J. (2012). Combining next-generation sequencing and microarray technology into a transcriptomics approach for the non-model organism Chironomus riparius. PLoS ONE, 7(10), e48096. https://doi.org/10.1371/journal.pone.0048096 -
Rauwerda, H., de Jong, M., de Leeuw, W. C., Spaink, H. P., & Breit, T. M. (2010). Integrating heterogeneous sequence information for transcriptome-wide microarray design; a Zebrafish example. BMC Research Notes, 3, 192. https://doi.org/10.1186/1756-0500-3-192 -
de Leeuw, W. C., Rauwerda, H., Inda, M. A., Bruning, O., & Breit, T. M. (2009). SigWinR; the SigWin-detector updated and ported to R. BMC Research Notes, 2(1), Article 205. https://doi.org/10.1186/1756-0500-2-205 -
de Leeuw, W. C., Rauwerda, H., Jonker, M. J., & Breit, T. M. (2008). Salvaging Affymetrix probes after probe-level re-annotation. BMC Research Notes, 1, Article 66. https://doi.org/10.1186/1756-0500-1-66
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