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Results: 163
Number of items: 163
  • Open Access
    van der Ploeg, G. R., White, F. T. G., Jakobsen, R. R., Westerhuis, J. A., Heintz-Buschart, A., & Smilde, A. K. (2026). ACMTF-R: Supervised multi-omics data integration uncovering shared and distinct outcome-associated variation. PLoS ONE, 21(1), Article e0339650. https://doi.org/10.1371/journal.pone.0339650
  • Open Access
    van der Ploeg, G. R. (2026). Microbiome data analysis using multi-way methods. [Thesis, fully internal, Universiteit van Amsterdam].
  • Open Access
    Westerhuis, J. A., Heintz-Buschart, A., Hoefsloot, H. C. J., van der Kloet, F. M., van der Ploeg, G. R., & White, F. T. G. (2025). Comparison of Chemometric Explorative Multi-Omics Data Analysis Methods Applied to a Mechanistic Pan-Cancer Cell Model. Journal of Chemometrics, 39(2), Article e70001. https://doi.org/10.1002/cem.70001
  • Open Access
    Leygeber, S., Diez-Simon, C., Großmann, J. L., Dubbelman, A. C., Harms, A. C., Westerhuis, J. A., Jacobs, D. M., Lindenburg, P. W., Hendriks, M. M. W. B., Ammerlaan, B. C. H., van den Berg, M. A., van Doorn, R., Mumm, R., Smilde, A. K., Hall, R. D., & Hankemeier, T. (2025). A Data-Driven Approach to Link GC-MS and LC-MS with Sensory Attributes of Chicken Bouillon with Added Yeast-Derived Flavor Products in a Combined Prediction Model. Metabolites, 15(5), Article 317. https://doi.org/10.3390/metabo15050317
  • Open Access
    Abegaz, F., Abedini, D., Dong, L., Westerhuis, J. A., van Eeuwijk, F., Bouwmeester, H., & Smilde, A. K. (2025). Analysis of microbiome high-dimensional experimental design data using generalized linear models and ANOVA simultaneous component analysis. Frontiers in Microbiomes, 4, Article 1584516. https://doi.org/10.3389/frmbi.2025.1584516
  • Open Access
    Isaiah, S., Westerhuis, J. A., Loots, D. T., Solomons, R., van Furth, M. T., van Elsland, S., van der Kuip, M., & Mason, S. (2024). The diagnostic potential of urine in paediatric patients undergoing initial treatment for tuberculous meningitis. Scientific Reports, 14, Article 19471. https://doi.org/10.1038/s41598-024-70419-1
  • Open Access
    van der Ploeg, G. R., Brandt, B. W., Keijser, B. J. F., van der Veen, M. H., Volgenant, C. M. C., Zaura, E., Smilde, A. K., Westerhuis, J. A., & Heintz-Buschart, A. (2024). Multi-way modelling of oral microbial dynamics and host-microbiome interactions during induced gingivitis. npj Biofilms and Microbiomes, 10, Article 89. https://doi.org/10.1038/s41522-024-00565-x
  • Open Access
    Abegaz, F., Abedini, D., White, F., Guerrieri, A., Zancarini, A., Dong, L., Westerhuis, J. A., van Eeuwijk, F., Bouwmeester, H., & Smilde, A. K. (2024). A strategy for differential abundance analysis of sparse microbiome data with group-wise structured zeros. Scientific Reports, 14, Article 12433. https://doi.org/10.1038/s41598-024-62437-w
  • Open Access
    Großmann, J. L., Westerhuis, J. A., Næs, T., & Smilde, A. K. (2023). Critical evaluation of assessor difference correction approaches in sensory analysis. Food Quality and Preference, 106, Article 104792. https://doi.org/10.1016/j.foodqual.2022.104792
  • Open Access
    Erdős, B., Westerhuis, J. A., Adriaens, M. E., O'Donovan, S. D., Xie, R., Singh-Povel, C. M., Smilde, A. K., & Arts, I. C. W. (2023). Analysis of high-dimensional metabolomics data with complex temporal dynamics using RM-ASCA. PLoS Computational Biology, 19(6), Article e1011221. https://doi.org/10.1371/journal.pcbi.1011221
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