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| Publication date |
12-12-2019
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| Description |
PARE-Seq / degradome dataset:
Obtained from 10µg of total RNA isolated from stem trichomes of cultivated (S. lycopersicum) and wild relatives of tomato (Solanum section Lycopersicon).
Degradome sequencing (sequencing of 5' end of uncapped mRNAs --> to find the site of microRNA cleavage). Degradome sequencing is also called PARE-Seq (see German et al., Nature Protocols 2009 4(3):356-62). Here, Vertis Biotech AG used a slightly modified protocol that generates 75nt reads from the 5' uncapped end of the mRNA.
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| Publisher |
Zenodo
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| Organisations |
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Faculty of Science (FNWI) - Swammerdam Institute for Life Sciences (SILS)
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| Document type |
Dataset
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| DOI |
https://doi.org/10.5281/zenodo.4034262 |
| Other links |
https://zenodo.org/records/4034262
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