Trinuclear copper biocatalytic center forms an active site of thiocyanate dehydrogenase

Authors
  • T.V. Tikhonova
  • D.Y. Sorokin
  • W.R. Hagen
  • M.G. Khrenova
  • G. Muyzer ORCID logo
  • T.V. Rakitina
  • I.G. Shabalin
  • A.A. Trofimov
  • S.I. Tsallagov
  • V.O. Popov
Publication date 10-03-2020
Journal Proceedings of the National Academy of Sciences of the United States of America
Volume | Issue number 117 | 10
Pages (from-to) 5280-5290
Number of pages 11
Organisations
  • Faculty of Science (FNWI) - Institute for Biodiversity and Ecosystem Dynamics (IBED)
Abstract

Biocatalytic copper centers are generally involved in the activation and reduction of dioxygen, with only few exceptions known. Here we report the discovery and characterization of a previously undescribed copper center that forms the active site of a copper-containing enzyme thiocyanate dehydrogenase (suggested EC 1.8.2.7) that was purified from the haloalkaliphilic sulfur-oxidizing bacterium of the genus Thioalkalivibrio ubiquitous in saline alkaline soda lakes. The copper cluster is formed by three copper ions located at the corners of a near-isosceles triangle and facilitates a direct thiocyanate conversion into cyanate, elemental sulfur, and two reducing equivalents without involvement of molecular oxygen. A molecular mechanism of catalysis is suggested based on high-resolution three-dimensional structures, electron paramagnetic resonance (EPR) spectroscopy, quantum mechanics/molecular mechanics (QM/MM) simulations, kinetic studies, and the results of site-directed mutagenesis.

Document type Article
Note With supplementary file
Language English
Related dataset Crystal structure of recombinant thiocyanate dehydrogenase from Thioalkalivibrio paradoxus saturated with copper The structure of thiocyanate dehydrogenase from Thioalkalivibrio paradoxus mutant with His 482 replaced by Gln The structure of thiocyanate dehydrogenase from Thioalkalivibrio paradoxus complex with acetate ions. The structure of thiocyanate dehydrogenase from Thioalkalivibrio paradoxus as isolated.
Published at https://doi.org/10.1073/pnas.1922133117
Other links https://www.scopus.com/pages/publications/85081681106
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