Adversarial reverse mapping of condensed-phase molecular structures: Chemical transferability

Open Access
Authors
Publication date 03-2021
Journal APL Materials
Article number 031107
Volume | Issue number 9 | 3
Number of pages 10
Organisations
  • Faculty of Science (FNWI) - Informatics Institute (IVI)
  • Faculty of Science (FNWI) - Van 't Hoff Institute for Molecular Sciences (HIMS)
Abstract

Switching between different levels of resolution is essential for multiscale modeling, but restoring details at higher resolution remains challenging. In our previous study, we have introduced deepBackmap, a deep neural-network-based approach to reverse-map equilibrated molecular structures for condensed-phase systems. Our method combines data-driven and physics-based aspects, leading to high-quality reconstructed structures. In this work, we expand the scope of our model and examine its chemical transferability. To this end, we train deepBackmap solely on homogeneous molecular liquids of small molecules and apply it to a more challenging polymer melt. We augment the generator's objective with different force-field-based terms as a prior to regularize the results. The best performing physical prior depends on whether we train for a specific chemistry or transfer our model. Our local environment representation combined with the sequential reconstruction of fine-grained structures helps in reaching transferability of the learned correlations.

Document type Article
Note With supplementary file
Language English
Published at https://doi.org/10.1063/5.0039102
Other links https://www.scopus.com/pages/publications/85102504772
Downloads
5.0039102 (Final published version)
Supplementary materials
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