E-BioFlow: Different perspectives on scientific workflows

Authors
  • A. Nijholt
Publication date 2008
Host editors
  • M. Elloumi
  • J. Küng
  • M. Linial
  • R.F. Murphy
  • K. Schneider
  • C. Toma
Book title Bioinformatics Research and Development
Book subtitle Second international conference, BIRD 2008, Vienna, Austria, July 7-9, 2008 : proceedings
ISBN
  • 9783540705987
Series Communications in Computer and Information Science
Event 2nd International Conference on Bioinformatics Research and Development (BIRD'08), Vienna, Austria
Pages (from-to) 243-257
Publisher Berlin: Springer
Organisations
  • Faculty of Science (FNWI) - Swammerdam Institute for Life Sciences (SILS)
Abstract
We introduce a new type of workflow design system called e-BioFlow and illustrate it by means of a simple sequence alignment workflow. E-BioFlow, intended to model advanced scientific workflows, enables the user to model a workflow from three different but strongly coupled perspectives: the control flow perspective, the data flow perspective, and the resource perspective. All three perspectives are of equal importance, but workflow designers from different domains prefer different perspectives as entry points for their design, and a single workflow designer may prefer different perspectives in different stages of workflow design. Each perspective provides its own type of information, visualisation and support for validation. Combining these three perspectives in a single application provides a new and flexible way of modelling workflows.
Document type Conference contribution
Language English
Published at https://doi.org/10.1007/978-3-540-70600-7_19
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