WWFedCBMIR World-Wide Federated Content-Based Medical Image Retrieval

Open Access
Authors
  • Z. Tabatabaei
  • Y. Wang
  • A. Colomer
  • J. Oliver Moll
Publication date 10-2023
Journal Bioengineering
Article number 1144
Volume | Issue number 10 | 10
Number of pages 19
Organisations
  • Faculty of Science (FNWI) - Informatics Institute (IVI)
Abstract
The paper proposes a federated content-based medical image retrieval (FedCBMIR) tool that utilizes federated learning (FL) to address the challenges of acquiring a diverse medical data set for training CBMIR models. CBMIR is a tool to find the most similar cases in the data set to assist pathologists. Training such a tool necessitates a pool of whole-slide images (WSIs) to train the feature extractor (FE) to extract an optimal embedding vector. The strict regulations surrounding data sharing in hospitals makes it difficult to collect a rich data set. FedCBMIR distributes an unsupervised FE to collaborative centers for training without sharing the data set, resulting in shorter training times and higher performance. FedCBMIR was evaluated by mimicking two experiments, including two clients with two different breast cancer data sets, namely BreaKHis and Camelyon17 (CAM17), and four clients with the BreaKHis data set at four different magnifications. FedCBMIR increases the F1 score (F1S) of each client from 96% to 98.1% in CAM17 and from 95% to 98.4% in BreaKHis, with 11.44 fewer hours in training time. FedCBMIR provides 98%, 96%, 94%, and 97% F1S in the BreaKHis experiment with a generalized model and accomplishes this in 25.53 fewer hours of training.
Document type Article
Language English
Published at https://doi.org/10.3390/bioengineering10101144
Other links https://www.scopus.com/pages/publications/85175172023
Downloads
WWFedCBMIR (Final published version)
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