Additional file 9: of A metagenomics roadmap to the uncultured genome diversity in hypersaline soda lake sediments
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| Publication date | 2018 |
| Description |
Dataset 6. Sheet 1 shows the MAGs positive for the marker gene acsB (K14138) encoding an acetyl-CoA synthase (ACS). The basis for Fig. 6, namely presence and absence of key genes involved in the Wood-Ljungdahly pathway, acetogenesis, methanogenesis, glycolysis and pyruvate to CO2 conversion is shown for each MAG. Sheet 2 shows the MAGs positive for the marker gene cdhC (K00193) encoding for the beta subunit of an acetyl-CoA decarboxylase synthase complex. While acsB and cdhC correspond roughly to the Bacterial-type and Archaeal-type (methanogens) enzymes with the same function, we found few discrepancies between marker gene and genome phylogeny within the Methanomassiliicoccaceae and Chloroflexi. (XLSX 52 kb)
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| Publisher | Figshare |
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| Document type | Dataset |
| Related publication | A metagenomics roadmap to the uncultured genome diversity in hypersaline soda lake sediments |
| DOI | https://doi.org/10.6084/m9.figshare.7109339.v1 |
| Other links | https://springernature.figshare.com/articles/Additional_file_9_of_A_metagenomics_roadmap_to_the_uncultured_genome_diversity_in_hypersaline_soda_lake_sediments/7109339/1 |
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